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Semester | Frühjahrsemester 2020 |
Angebotsmuster | Jedes Frühjahrsem. |
Dozierende | Mihaela Zavolan (mihaela.zavolan@unibas.ch, BeurteilerIn) |
Inhalt | This course will introduce students to fundamental problems in Bioinformatics/Computational Biology such as: - Evolution: Mathematical models for the evolution of DNA sequences. - Alignment and Phylogeny reconstruction: inferring evolutionary relationships between sequences. - Functional annotation: Finding genes and regulatory sequences in fully sequenced genomes. - Families of coding sequences: Hidden Markov models of protein domains - Gene expression networks: Inferring regulatory factors driving gene expression. Students should have a good understanding of calculus, linear algebra, combinatorics and algorithms and should be familiar with concepts of molecular biology. |
Lernziele | Students learn about the basic problem domain of bioinformatics as well as a wide range of algorithms for sequence analysis. They will learn about the commonly used languages of bioinformatics (mostly Python) and will implement basic bioinformatics algorithms. |
Weblink | https://adam.unibas.ch |
Teilnahmebedingungen | First year courses must be accomplished. Mathematical background is needed in calculus, linear algrebra, diffential equations. Knowledge about discrete mathematics, stochastic processes and fundamental computer science algorithms is a plus. Basic programming skills and basic understanding in physics, chemistry and molecular biology (cells, DNA, RNA, proteins, etc.) is necessary. |
Unterrichtssprache | Englisch |
Einsatz digitaler Medien | kein spezifischer Einsatz |
Intervall | Wochentag | Zeit | Raum |
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Keine Einzeltermine verfügbar, bitte informieren Sie sich direkt bei den Dozierenden.
Module |
Cycle E: Computational and Systems Biology (Masterstudium: Molekularbiologie) Modul: Applications and Related Topics (Bachelorstudium: Computer Science) Modul: Computational Biology (Bachelorstudium: Computational Sciences) Modul: Computational Biology (Bachelorstudium: Computational Sciences (Studienbeginn vor 01.08.2018)) (Pflicht) Modul: Computational Chemistry (Bachelorstudium: Computational Sciences (Studienbeginn vor 01.08.2018)) Modul: Computational Physics (Bachelorstudium: Computational Sciences (Studienbeginn vor 01.08.2018)) Modul: Computational Sciences II (Bachelorstudium: Computational Sciences (Studienbeginn vor 01.08.2018)) Modul: Computational Sciences II (Bachelorstudium: Computational Sciences) |
Leistungsüberprüfung | Lehrveranst.-begleitend |
Hinweise zur Leistungsüberprüfung | Written exam and exercises Exam: Thursday, May 28, 13-15h. Klingelbergstr. 61, Lounge (1301), Level E 13 (top floor) |
An-/Abmeldung zur Leistungsüberprüfung | Anm.: Belegen Lehrveranstaltung; Abm.: stornieren |
Wiederholungsprüfung | keine Wiederholungsprüfung |
Skala | 1-6 0,5 |
Wiederholtes Belegen | beliebig wiederholbar |
Zuständige Fakultät | Philosophisch-Naturwissenschaftliche Fakultät, studiendekanat-philnat@unibas.ch |
Anbietende Organisationseinheit | Departement Biozentrum |