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| Semester | fall semester 2019 |
| Course frequency | Every fall sem. |
| Lecturers | Volker Roth (volker.roth@unibas.ch, Assessor) |
| Content | In this lecture, an introduction into main bioinformatics algorithms is provided. Covered topics include Hidden Markov Models, Markov chains, phylogenetic trees, sampling and annealing methods, and methods for sequence alignment. |
| Learning objectives | This lecture provides an introduction into algorithms and concepts that are important in computational biology / bioinformatics. Students can understand the main algorithmic design principles for problems like sequence alignment, motif finding and phylogenetic inference. Further, students are familiar with advanced sampling and annealing methods and their applications in bioinformatics. |
| Bibliography | R. Durbin: Biological sequence analysis |
| Weblink | link to course web page |
| Admission requirements | Mathematische Methoden I Mathematische Methoden II Einführung in die Statistik |
| Language of instruction | English |
| Use of digital media | No specific media used |
| Interval | Weekday | Time | Room |
|---|
No dates available. Please contact the lecturer.
| Modules |
Doctorate Computer Science: Recommendations (PhD subject: Computer Science) Kernfächer und Seminar (Master's Studies: Computational Biology and Bioinformatics) Modul: Concepts of Machine Intelligence (Master's degree subject: Computer Science) Module: Applications of Distributed Systems (Master's Studies: Computer Science) Module: Applications of Machine Intelligence (Master's Studies: Computer Science) |
| Assessment format | continuous assessment |
| Assessment details | Oral exam expected date: Wednesday, 18 December and Thursday, 19 December 2019 Room: Office 06.003 |
| Assessment registration/deregistration | Reg.: course registration, dereg: cancel course registration |
| Repeat examination | no repeat examination |
| Scale | 1-6 0,5 |
| Repeated registration | as often as necessary |
| Responsible faculty | Faculty of Science, studiendekanat-philnat@unibas.ch |
| Offered by | Fachbereich Informatik |