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21525-01 - Lecture: Introduction to NMR spectroscopy of proteins and other biomolecules 3 CP

Semester fall semester 2021
Course frequency Every fall sem.
Lecturers Daniel Häussinger (daniel.haeussinger@unibas.ch, Assessor)
Content Instrumentation; labeling techniques and sample preparation; water suppression techniques; standard 2D and 3D(4D) pulse sequences for backbone and sidechain assignment; structure determination by NMR; relaxation and dynamics; residual dipolar couplings; paramagnetic relaxation enhancement; pseudo-contact shifts; protein-ligand and protein-protein interactions; techniques for large proteins.
Learning objectives Comprehension of the basic concepts of protein NMR. Participants should be enabled to follow the literature in the field and critically assess the use of NMR in their own research.
Bibliography J. Cavanagh et al., Protein NMR Spectroscopy, Wiley, 2007
P.J. Hore et al., NMR: The Toolkit, Oxford Chemistry Primer #92, Oxford University Press, 2000
S. M. Pascal, NMR Primer: An hsqc-based approach, IM Publications, 2008
S. Berger, S. Braun, 200 and more NMR experiments, Wiley, 2004
Comments Exercises will be provided to deepen the understanding on a practical level.

 

Admission requirements Basic knowledge of small molecule NMR spectroscopy is very helpful, but not obligatory.
Course application Register on MOnA.
Language of instruction English
Use of digital media No specific media used

 

Interval Weekday Time Room
wöchentlich Wednesday 13.15-16.00 Chemie, Organische, Kleiner Hörsaal OC

Dates

Date Time Room
Wednesday 22.09.2021 13.15-16.00 Chemie, Organische, Kleiner Hörsaal OC
Wednesday 29.09.2021 13.15-16.00 Chemie, Organische, Kleiner Hörsaal OC
Wednesday 06.10.2021 13.15-16.00 Chemie, Organische, Kleiner Hörsaal OC
Wednesday 13.10.2021 13.15-16.00 Chemie, Organische, Kleiner Hörsaal OC
Wednesday 20.10.2021 13.15-16.00 Chemie, Organische, Kleiner Hörsaal OC
Wednesday 27.10.2021 13.15-16.00 Chemie, Organische, Kleiner Hörsaal OC
Wednesday 03.11.2021 13.15-16.00 Chemie, Organische, Kleiner Hörsaal OC
Wednesday 10.11.2021 13.15-16.00 Chemie, Organische, Kleiner Hörsaal OC
Wednesday 17.11.2021 13.15-16.00 Chemie, Organische, Kleiner Hörsaal OC
Wednesday 24.11.2021 13.15-16.00 Chemie, Organische, Kleiner Hörsaal OC
Wednesday 01.12.2021 13.15-16.00 Chemie, Organische, Kleiner Hörsaal OC
Wednesday 08.12.2021 13.15-16.00 Chemie, Organische, Kleiner Hörsaal OC
Wednesday 15.12.2021 13.15-16.00 Chemie, Organische, Kleiner Hörsaal OC
Wednesday 22.12.2021 13.15-16.00 Chemie, Organische, Kleiner Hörsaal OC
Modules Doctorate Chemistry: Recommendations (PhD subject: Chemistry)
Module Specialisation: Chemistry (Master's Studies: Nanosciences)
Module: Organic Chemistry (Master's Studies: Chemistry)
Assessment format continuous assessment
Assessment details A short paper from recent primary literature will be provided and the students will have to answer a number of questions on the text. Reading time: 20 minutes, questionnaire: 60 minutes.
Assessment registration/deregistration Reg.: course registration, dereg: cancel course registration
Repeat examination no repeat examination
Scale 1-6 0,5
Repeated registration as often as necessary
Responsible faculty Faculty of Science, studiendekanat-philnat@unibas.ch
Offered by Departement Chemie

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